BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004H06SP1|AL425297
(948 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1761 1244 0.0
>3x_Contig1761
Length = 23186
Score = 1244 bits (605), Expect = 0.0
Identities = 813/916 (88%), Gaps = 1/916 (0%)
Strand = Plus / Plus
Query: 34 aaccataatcacgttaacaactaatccaattagcacgtctatttacagactatacttttt 93
||||| |||||||| |||||||||||||| |||||||||||||||||||| ||||| | |
Sbjct: 18335 aaccagaatcacgtgaacaactaatccaagtagcacgtctatttacagacgatactgtgt 18394
Query: 94 ttkataactttaccagaccatatttattckccatttctaaatacattaacttkcaaccat 153
| ||||||| ||||||||||||||| || ||||| |||||||||||||||| |||||||
Sbjct: 18395 tggataacttgaccagaccatatttagtcgccattgctaaatacattaacttgcaaccat 18454
Query: 154 ttkktacckatttmattttackttaccktatcckttacaagatkttagakttaaadacgk 213
|| |||| || | || |||| ||||| ||||| ||||||||| ||||| ||||| |||
Sbjct: 18455 ttggtaccgatgtcatgttacgttaccgtatccgttacaagatgttagagttaaagacgg 18514
Query: 214 atkatttkkctatctattackaaggakttkaatcattakackctatttaatttcttackg 273
|| |||| ||||||||||| ||||| || |||||||| || ||||| |||| | ||| |
Sbjct: 18515 atgatttggctatctattacgaaggagttgaatcattagacgctattgaattgcgtacgg 18574
Query: 274 cttttkcttctakaggtatcataaactttaackttgaataaatttttctackttataact 333
||| | |||||| |||||||| |||||| ||| | ||| ||| | |||||| | ||||||
Sbjct: 18575 cttgtgcttctagaggtatcagaaacttgaacgtggaagaaagtgttctacgtgataact 18634
Query: 334 tkaagattttkttaaacattadgcttaaggataakattccatcaactttactatttattk 393
| ||||||| |||||||| | ||| |||||||| |||||||||||||||||| ||||
Sbjct: 18635 tgaagatttggttaaacatgaggctgaaggataagattccatcaactttactagttatgg 18694
Query: 394 ctaccgcatacacttackgtkatattkgttctaakaakacgttttattacgccttatttt 453
||||||||||||||||| || ||||| ||||||| || ||||| ||| ||||||||| |
Sbjct: 18695 ctaccgcatacacttacggtgatattggttctaagaagacgttgtatgacgccttatgtg 18754
Query: 454 acgtcttatcttktattccatackakttktaccatkaakttaakgtcaattttttttaak 513
||||||||||| ||||||| || | || |||||| || |||| |||||| || || ||
Sbjct: 18755 acgtcttatctggtattccagacgagttgtaccatgaagttaaggtcaatgttgttgaag 18814
Query: 514 akgattcttctactaacaaatctaatatkgcacattttaaggaacaanttgaaatcatta 573
| |||||| |||||||||||||||| || ||||| || ||||||||| | |||||||| |
Sbjct: 18815 aggattctgctactaacaaatctaagatggcacagttgaaggaacaagtggaaatcatga 18874
Query: 574 aggaanaatancaacaagaaaakgattcagttkttatatttaaggacgaactaaktttag 633
||||| || | ||||||||||| ||| ||||| ||| | ||||||||||||||| |||||
Sbjct: 18875 aggaagaagagcaacaagaaaaggatgcagttgttagagttaaggacgaactaagtttag 18934
Query: 634 atgctgtttatgccaaaactgtaagtcaaactgaaaaagctgccccccaagatggcgaaa 693
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18935 atgctgttgatgccaaaactgtaagtcaaactgaaaaagctgccccccaagatggcgaaa 18994
Query: 694 agaagccacataatgccagaaccgaaagtgaatccaccgaggccactaagaaaaactaat 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18995 agaagccacataatgccagaaccgaaagtgaatccaccgaggccactaagaaaaactaat 19054
Query: 754 tctgaagttagtaagactcctaataccttagtcaatgatcattaacgaccaattcaagca 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19055 tctgaagttagtaagactcctaataccttagtcaatgatcattaacgaccaattcaagca 19114
Query: 814 ttagaatcaagtttgagctaatcagttactgatagctcactataacgaacatttggcata 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19115 ttagaatcaagtttgagctaatcagttactgatagctcactataacgaacatttggcata 19174
Query: 874 taatttcagattcaatttatcattattttgtagcagagcgctgtwatttgtatatatt-a 932
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 19175 taatttcagattcaatttatcattattttgtagcagagcgctgtaatttgtatatattaa 19234
Query: 933 aaaaaaaagcttgctt 948
||||||||||||||||
Sbjct: 19235 aaaaaaaagcttgctt 19250
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.718 1.35
Gapped
Lambda K H
1.43 0.718 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5275
Number of Sequences: 1807
Number of extensions: 5275
Number of successful extensions: 116
Number of sequences better than 1.0e-20: 1
length of query: 948
length of database: 10,358,551
effective HSP length: 16
effective length of query: 932
effective length of database: 10,329,639
effective search space: 9627223548
effective search space used: 9627223548
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.8 bits)
S1: 11 (23.1 bits)
S2: 49 (101.3 bits)